This report describes the use of pyrosequencing technologies to generate the first comparative analysis of de novo assembled transcriptome data from cultured and wild specimens of the South African abalone. The transcriptome data and database described here provide a significant genomic resource for abalone research. The data set annotated 11,240 genes, which matched genes with known functions in other species. A large number of transmembrane protein domains (4087) that may indicate a high portion of undiscovered gene receptors were identified. Further, we detected an interesting set of transcription factors (516) that are valuable candidates for participating in regulatory events in developmental (such as cell proliferation and differentiation) and reproductive processes.

Barbara Picone

Clint Rhode

Rouvay Roodt-Wilding

Marine Genomics

该杂志发表关于海洋（和淡水）生物的基因、染色质、染色体和（元）基因组的所有功能和进化方面的论文。它涉及对更广泛的环境科学框架的新基因组洞察。本期刊范围内的主题包括：• 种群基因组学和生态学• 进化和发育基因组学• 比较基因组学• 宏基因组学• 环境基因组学• 系统生物学更具体的主题包括：水生生物的地理和系统发育特征、生物和群落的代谢能力和途径、生物地球化学循环、基因组学和应用于微生物生态学的综合方法，包括（元）转录组学和（元）蛋白质组学、传染病追踪、环境压力、全球气候变化和生态系统建模。

The journal Marine Genomics publishes research papers on the functions and evolution of genes, chromatin, chromosomes, and (meta)genomes of marine and freshwater organisms. It encompasses new genomic insights within a broader environmental science framework. Topics covered in this journal include: population genomics and ecology, evolutionary and developmental genomics, comparative genomics, metagenomics, environmental genomics, and systems biology. More specific subjects include the geographical and phylogenetic characteristics of aquatic organisms, the metabolic capabilities and pathways of organisms and communities, biogeochemical cycles, genomics, and integrated approaches applied to microbial ecology, including (meta)transcriptomics and (meta)proteomics, infectious disease tracking, environmental stress, global climate change, and ecosystem modeling.

《Marine Genomics》期刊发表关于海洋和淡水生物的基因、染色质、染色体及（元）基因组的功能和进化方面的研究论文。该期刊的主题涵盖了更广泛的环境科学框架下的新基因组洞察，包括：种群基因组学与生态学、进化与发育基因组学、比较基因组学、宏基因组学、环境基因组学和系统生物学。具体研究主题包括水生生物的地理和系统发育特征、生物和群落的代谢能力与途径、生物地球化学循环、基因组学以及应用于微生物生态学的综合方法，如（元）转录组学和（元）蛋白质组学、传染病追踪、环境压力、全球气候变化和生态系统建模。

Transcriptome profiles of wild and cultured South African abalone, Haliotis midae

The use of pyrosequencing technologies to generate the first comparative analysis of de novo assembled transcriptome data from cultured and wild specimens of the South African abalone provides a significant genomic resource for abalone research.

Category	Quartile
生物学	4
生物学, 遗传学	4

Transcriptome profiles of wild and cultured South African abalone, Haliotis midae

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Journal Info

Category	Quartile
GENETICS & HEREDITY	4