Bifurcations and Homoclinic Orbits of a Model Consisting of Vegetation–Prey–Predator Populations

2024-9-12

A Cancer Subpopulation Competition Model Reveals Optimal Levels of Immune Response that Minimize Tumor Size

2024-9-10

PDFll: Predictors of Disorder and Function of Proteins from the Language of Life

2024-9-9

Imputing Metagenomic Hi-C Contacts Facilitates the Integrative Contig Binning Through Constrained Random Walk with Restart

2024-9-9

Network-Constrained Eigen-Single-Cell Profile Estimation for Uncovering Crucial Immunogene Regulatory Systems in Human Bone Marrow

2024-9-6

Rosalind Franklin Society Proudly Announces the 2023 Award Recipient for <i>Journal of Computational Biology</i>

2024-9-1

Unveiling Commonalities and Differences in Genetic Regulations via Two-Way Fusion

2024-8-12

S<scp>patial</scp>CTD: A Large-Scale Tumor Microenvironment Spatial Transcriptomic Dataset to Evaluate Cell Type Deconvolution for Immuno-Oncology

2024-8-8

HTFSMMA: Higher-Order Topological Guided Small Molecule–MicroRNA Associations Prediction

2024-8-7

From Policy to Prediction: Assessing Forecasting Accuracy in an Integrated Framework with Machine Learning and Disease Models

2024-8-2

A Rigorous Framework to Classify the Postduplication Fate of Paralogous Genes

2024-8-1

A Hybrid GNN Approach for Improved Molecular Property Prediction

2024-7-31

Protein–Protein Interaction Prediction Model Based on ProtBert-BiGRU-Attention

2024-7-29

BiRNN-DDI: A Drug-Drug Interaction Event Type Prediction Model Based on Bidirectional Recurrent Neural Network and Graph2Seq Representation

2024-7-25

SuperTAD-Fast: Accelerating Topologically Associating Domains Detection Through Discretization

2024-7-24

GraphSlimmer: Preserving Read Mappability with the Minimum Number of Variants

2024-7-11

<i>Pairwise Distances and the Problem of Multiple Optima</i>

2024-7-10

Sketching Methods with Small Window Guarantee Using Minimum Decycling Sets

2024-7-9

Using Attention-UNet Models to Predict Protein Contact Maps

2024-7-9

CFINet: Cross-Modality MRI Feature Interaction Network for Pseudoprogression Prediction of Glioblastoma

2024-7-8

Estimating Haplotype Structure and Frequencies: A Bayesian Approach to Unknown Design in Pooled Genomic Data

2024-7-3

Screening Nonlinear miRNA Features of Breast Cancer by Using Ensemble Regularized Polynomial Logistic Regression

2024-7-1

Detection and Segmentation of Glioma Tumors Utilizing a UNet Convolutional Neural Network Approach with Non-Subsampled Shearlet Transform

2024-6-27

Estimating Enzyme Expression and Metabolic Pathway Activity in <i>Borreliella</i>-Infected and Uninfected Mice

2024-6-27

Nearly Instantaneous Time-Varying Reproduction Number for Contagious Diseases—a Direct Approach Based on Nonlinear Regression

2024-6-26

NPI-DCGNN: An Accurate Tool for Identifying ncRNA-Protein Interactions Using a Dual-Channel Graph Neural Network

2024-6-26

Combining Complementarity and Binding Energetics in the Assessment of Protein Interactions: EnCPdock—A Practical Manual

2024-6-17

QMix: An Efficient Program to Automatically Estimate Multi-Matrix Mixture Models for Amino Acid Substitution Process

2024-6-11

A Comparative Study of Gene Co-Expression Thresholding Algorithms

2024-6-1

Boolean Network Models of Human Preimplantation Development

2024-6-1

Phylogenetic and Chemical Probing Information as Soft Constraints in RNA Secondary Structure Prediction

2024-6-1

A Fusion Learning Model Based on Deep Learning for Single-Cell RNA Sequencing Data Clustering

2024-6-1

Visual Recalibration and Gating Enhancement Network for Radiology Report Generation

2024-6-1

Improved Denoising of Cryo-Electron Microscopy Micrographs with Simulation-Aware Pretraining

2024-6-1

Special Issue, Part I 19th International Symposium on Bioinformatics Research and Applications (ISBRA 2023)

2024-6-1

Toward the Reconciliation of Inconsistent Molecular Structures from Biochemical Databases

2024-6-1

Enhanced Compression of <i>k</i>-Mer Sets with Counters via de Bruijn Graphs

2024-5-31

A Branch-and-Bound Algorithm for the Molecular Ordered Covering Problem

2024-5-22

Transcriptional Hubs Within Cliques in Ensemble Hi-C Chromatin Interaction Networks

2024-5-20

More Is Faster: Why Population Size Matters in Biological Search

2024-5-1

A Bayesian Change Point Model for Dynamic Alternative Transcription Start Site Usage During Cellular Differentiation

2024-5-1

Singular Value Decomposition-Based Penalized Multinomial Regression for Classifying Imbalanced Medulloblastoma Subgroups Using Methylation Data

2024-5-1

Enforcing Temporal Consistency in Migration History Inference

2024-5-1

On Minimizers and Convolutional Filters: Theoretical Connections and Applications to Genome Analysis

2024-4-30

An Integer Linear Programming Model to Optimize Coding DNA Sequences By Joint Control of Transcript Indicators

2024-4-30

DNASCANNER v2: A Web-Based Tool to Analyze the Characteristic Properties of Nucleotide Sequences

2024-4-25

RECOMB Satellite Conference on Comparative Genomics(RECOMB-CG 2023)

2024-4-1

Orthology and Paralogy Relationships at Transcript Level

2024-4-1

Asymmetric Cluster-Based Measures for Comparative Phylogenetics

2024-4-1

A Fixed-Parameter Tractable Algorithm for Finding Agreement Cherry-Reduced Subnetworks in Level-1 Orchard Networks

2024-4-1