FUNGAL DIVERSITY - 中国科学院昆明植物研究所官方期刊 - 是一份国际同行评审期刊，发表真菌学各个领域的论文，优先发表涵盖生物多样性、系统和分子系统发育的文章。欢迎新的研究文章和评论文章，但鼓励希望发表清单的作者接近区域期刊，而新种和属的引入通常应得到分子数据的支持。

Fungal Diversity is the official journal of the Kunming Institute of Botany, Chinese Academy of Sciences, dedicated to publishing research papers in all areas of mycology. The journal prioritizes articles that cover biodiversity, systematics, and molecular phylogenetics. We welcome new research and review articles, but authors wishing to publish are encouraged to approach regional journals first. Furthermore, the introduction of new species and genera typically requires supporting molecular data.

《Fungal Diversity》是中国科学院昆明植物研究所官方期刊，致力于发表真菌学各个领域的研究论文。期刊优先考虑涵盖生物多样性、系统学和分子系统发育的文章。我们欢迎新的研究和评论文章，但鼓励希望发表的作者首先接触区域期刊。此外，新种和新属的引入通常需要有分子数据的支持。

Fungal Diversity

Cheyenne E. Stratton

Sara A. Bolds

Lindsey S. Reisinger

Donald C. Behringer

Amjad Khalaf

Jamie Bojko

Microsporidia and invertebrate hosts: genome-informed taxonomy surrounding a new lineage of crayfish-infecting Nosema spp. (Nosematida)

微孢子虫与无脊椎宿主：围绕新线系感染小龙虾的Nosema spp.（Nosematida）的基因组信息分类

Abstract Fungi are one of the most diverse groups of organisms with an estimated number of species in the range of 2–3 million. The higher-level ranking of fungi has been discussed in the framework of molecular phylogenetics since Hibbett et al., and the definition and the higher ranks (e.g., phyla) of the ‘true fungi’ have been revised in several subsequent publications. Rapid accumulation of novel genomic data and the advancements in phylogenetics now facilitate a robust and precise foundation for the higher-level classification within the kingdom. This study provides an updated classification of the kingdom Fungi , drawing upon a comprehensive phylogenomic analysis of Holomycota , with which we outline well-supported nodes of the fungal tree and explore more contentious groupings. We accept 19 phyla of Fungi, viz . Aphelidiomycota , Ascomycota , Basidiobolomycota , Basidiomycota , Blastocladiomycota , Calcarisporiellomycota , Chytridiomycota , Entomophthoromycota , Entorrhizomycota , Glomeromycota , Kickxellomycota , Monoblepharomycota , Mortierellomycota , Mucoromycota , Neocallimastigomycota , Olpidiomycota , Rozellomycota , Sanchytriomycota, and Zoopagomycota . In the phylogenies, Caulochytriomycota resides in Chytridiomycota ; thus, the former is regarded as a synonym of the latter, while Caulochytriomycetes is viewed as a class in Chytridiomycota . We provide a description of each phylum followed by its classes. A new subphylum, Sanchytriomycotina Karpov is introduced as the only subphylum in Sanchytriomycota . The subclass Pneumocystomycetidae Kirk et al. in Pneumocystomycetes , Ascomycota is invalid and thus validated. Placements of fossil fungi in phyla and classes are also discussed, providing examples.

Nalin N. Wijayawardene

Kevin D. Hyde

Kirill V. Mikhailov

Gábor Péter

André Aptroot

Carmen L. A. Pires-Zottarelli

Bruno T. Goto

Yuri S. Tokarev

Danny Haelewaters

Samantha C. Karunarathna

Paul M. Kirk

André L. C. M. de A. Santiago

Ramesh K. Saxena

Nathan Schoutteten

Madhara K. Wimalasena

Vladimir V. Aleoshin

Abdullah M. S. Al-Hatmi

Kahandawa G. S. U. Ariyawansa

Amanda R. Assunção

Thushara C. Bamunuarachchige

Hans-Otto Baral

D. Jayarama Bhat

Janusz Błaszkowski

Teun Boekhout

Nattawut Boonyuen

Michael Brysch-Herzberg

Bin Cao

Jonathan Cazabonne

Xue-Mei Chen

Claudia Coleine

Dong-Qin Dai

Heide-Marie Daniel

Suzana B. G. da Silva

Francisco Adriano de Souza

Somayeh Dolatabadi

Manish K. Dubey

Arun K. Dutta

Aseni Ediriweera

Eleonora Egidi

Mostafa S. Elshahed

Xinlei Fan

Juliana R. B. Felix

Mahesh C. A. Galappaththi

Marizeth Groenewald

Li-Su Han

Bo Huang

Vedprakash G. Hurdeal

Anastasia N. Ignatieva

Gustavo H. Jerônimo

Ana L. de Jesus

Serhii Kondratyuk

Jaturong Kumla

Martin Kukwa

Qirui Li

Juliana L. R. Lima

Xiao-Yong Liu

Wenhua Lu

H. Thorsten Lumbsch

Hugo Madrid

Franco Magurno

Guy Marson

Eric H. C. McKenzie

Audrius Menkis

Armin Mešić

Elaine C. R. Nascimento

Elena S. Nassonova

Yong Nie

Naasson V. L. Oliveira

Emilia A. Ossowska

Julia Pawłowska

Ursula Peintner

Igor R. Pozdnyakov

Bhagya M. Premarathne

A. K. Hasith Priyashantha

C. Alisha Quandt

Mariana B. Queiroz

Kunhiraman C. Rajeshkumar

Mubashar Raza

Niranjan Roy

Milan C. Samarakoon

Alessandra A. Santos

Lidiane A. Santos

Felix Schumm

Laura Selbmann

Faruk Selçuk

D. Rabern Simmons

Anastasia V. Simakova

Maudy Th. Smith

Onden Paraparath Sruthi

Nakarin Suwannarach

Kazuaki Tanaka

Saowaluck Tibpromma

Elias O. Tomás

Merve Ulukapı

Nicolas Van Vooren

Dhanushka N. Wanasinghe

Evi Weber

Qianzhen Wu

Er Fu Yang

Ryuichi Yoshioka

Classes and phyla of the kingdom Fungi

真菌界的类和门

High-throughput sequencing studies generate vast amounts of taxonomic data. Evolutionary ecological hypotheses of the recovered taxa and Species Hypotheses are difficult to test due to problems with alignments and the lack of a phylogenetic backbone. We propose an updated phylum- and class-level fungal classification accounting for monophyly and divergence time so that the main taxonomic ranks are more informative. Based on phylogenies and divergence time estimates, we adopt phylum rank to Aphelidiomycota, Basidiobolomycota, Calcarisporiellomycota, Glomeromycota, Entomophthoromycota, Entorrhizomycota, Kickxellomycota, Monoblepharomycota, Mortierellomycota and Olpidiomycota. We accept nine subkingdoms to accommodate these 18 phyla. We consider the kingdom Nucleariae (phyla Nuclearida and Fonticulida) as a sister group to the Fungi. We also introduce a perl script and a newick-formatted classification backbone for assigning Species Hypotheses into a hierarchical taxonomic framework, using this or any other classification system. We provide an example of testing evolutionary ecological hypotheses based on a global soil fungal data set.

Leho Tedersoo

Santiago Sánchez-Ramírez

Urmas Kõljalg

Mohammad Bahram

Markus Döring

Dmitry Schigel

Tom May

Martin Ryberg

Kessy Abarenkov

High-level classification of the Fungi and a tool for evolutionary ecological analyses

真菌的高级分类及进化生态分析工具

Molecular phylogenies using 1–4 gene regions and information on ecology, morphology and pigment chemistry were used in a partial revision of the agaric family Hygro- phoraceae. The phylogenetically supported genera we recognize here in the Hygrophoraceae based on these and previous analyses are: Acantholichen, Ampulloclitocybe, Arrhenia, Cantharellula, Cantharocybe, Chromosera, Chrysomphalina, Cora, Corella, Cuphophyllus, Cyphellostereum, Dictyonema, Eonema, Gliophorus, Haasiella, Humidicutis, Hygroaster, Hygrocybe, Hygrophorus, Lichenomphalia, Neohygrocybe, Porpolomopsis and Pseudoarmillariella. A new genus that is sister to Chromosera is described as Gloioxanthomyces. Revisions were made at the ranks of subfamily, tribe, genus, subgenus, section and subsection. We present three new subfamilies, eight tribes (five new), eight subgenera (one new, one new combination and one stat. nov.), 26 sections (five new and three new combinations and two stat. nov.) and 14 subsections (two new, two stat. nov.). Species of Chromosera, Gliophorus, Humidicutis, and Neohygrocybe are often treated within the genus Hygrocybe; we therefore provide valid names in both classification systems. We used a minimalist approach in transferring genera and creating new names and combinations. Consequently, we retain in the Hygrophoraceae the basal cuphophylloid grade comprising the genera Cuphophyllus, Ampulloclitocybe and Cantharocybe, despite weak phylogenetic support. We include Aeruginospora and Semiomphalina in Hygrophoraceae based on morphology though molecular data are lacking. The lower hygrophoroid clade is basal to Hygrophoraceae s.s., comprising the genera Aphroditeola, Macrotyphula, Phyllotopsis, Pleurocybella, Sarcomyxa, Tricholomopsis and Typhula.

D. Jean Lodge

Mahajabeen Padamsee

P. Brandon Matheny

M. Catherine Aime

Sharon A. Cantrell

David Boertmann

Alexander Kovalenko

Alfredo Vizzini

Bryn T. M. Dentinger

A. Martyn Ainsworth

Jean-Marc Moncalvo

Rytas Vilgalys

Ellen Larsson

Robert Lücking

Gareth W. Griffith

Matthew E. Smith

Lorelei L. Norvell

Dennis E. Desjardin

Scott A. Redhead

Clark L. Ovrebo

Edgar B. Lickey

Enrico Ercole

Karen W. Hughes

Régis Courtecuisse

Anthony Young

Manfred Binder

Andrew M. Minnis

Daniel L. Lindner

Beatriz Ortiz-Santana

John Haight

Thomas Læssøe

Timothy J. Baroni

József Geml

Tsutomu Hattori

Molecular phylogeny, morphology, pigment chemistry and ecology in Hygrophoraceae (Agaricales)

水玉霉科（伞菌目）的分子系统发育、形态学、色素化学和生态学

Abbreviation	Fungal Divers.
Journal Impact	24.70
Quartiles(Global)	MYCOLOGY(Q1)

ISSN	1560-2745, 1878-9129
h-index	123
Top Journals	Yes

Publication Information	Publisher: Springer Nature，Publishing cycle: Bimonthly，Journal Type: journal，Open Access Journals: No
Basic data	Year of publication: 1998，Proportion of original research papers: 64.29%，Self Citation Rate:8.20%， Gold OA Rate: 30.51%
Average review cycle	网友分享经验：平均6.0个月
Average recruitment ratio	网友分享经验：一般

Fungal Diversity

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Microsporidia and invertebrate hosts: genome-informed taxonomy surrounding a new lineage of crayfish-infecting Nosema spp. (Nosematida)

Classes and phyla of the kingdom Fungi

High-level classification of the Fungi and a tool for evolutionary ecological analyses

Molecular phylogeny, morphology, pigment chemistry and ecology in Hygrophoraceae (Agaricales)

Biogeography and phylogeography of Fusarium: a review

Ophiostomatoid fungi associated with Ips bark beetles in China

Notes, outline, taxonomy and phylogeny of brown-spored hyphomycetes

Microsporidia and invertebrate hosts: genome-informed taxonomy surrounding a new lineage of crayfish-infecting Nosema spp. (Nosematida)

Fungal numbers: global needs for a realistic assessment

Classes and phyla of the kingdom Fungi